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logsdon-lab
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CenMAP
Centromere mapping and annotation pipeline
MIT License
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feat: Docker and plot fixes
#70
Closed
koisland
closed
2 months ago
koisland
commented
2 months ago
Changed
ModDotPlot
plot percent identity thresholds to show subtler variation.
Changed HOR structural variation plot to start at 0 and added x and y text.
Resolves #57
Changed HOR structural variation plot to Mbp instead of kbp.
Added
dna-brnn
compilation step with conda.
Added containerization commands to Makefile.
Resolves #68
Added tests section to README.md.
Added workflow containerization.
Fixed regex wildcard warnings.
Removed
ModDotPlot
git submodule and replaced it with git repo in pip installation.
Removed and merged conda environments to save space.
ModDotPlotplot percent identity thresholds to show subtler variation.dna-brnncompilation step with conda.ModDotPlotgit submodule and replaced it with git repo in pip installation.