Phylogeny display from multiple-phylogeny files seems to have too many tip labels

lonelyjoeparker / qmul-genome-convergence-pipeline

API and binaries for phylogenomic analyses, particularly comparison of input trees/alignments (CONTEXT) and detecting genomic convergence

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Phylogeny display from multiple-phylogeny files seems to have too many tip labels #44

Closed lonelyjoeparker closed 9 years ago

lonelyjoeparker commented 9 years ago

Phylogeny display when lots of phylogenies / phylogeny files containing >1 tree seems to give odd results: canvas includes far too many taxon tip labels, seemingly due to mismatch between tip label list and tree branches array. alternatively, maybe only part of the file is being parsed. could also be because differing numbers taxa in tree lines screengrabunhappytree

lonelyjoeparker commented 9 years ago

Closed with commit https://github.com/lonelyjoeparker/qmul-genome-convergence-pipeline/commit/58c758d29d85612e497b4e5f4a2d5b729e2e4ce7

Screenshot: contextpolytomiesfixed