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loosolab / TOBIAS_snakemake

Snakemake pipeline for running TOBIAS analysis
MIT License
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Problem with Snakefile line 143 #3

Closed bioarpit1 closed 1 year ago

bioarpit1 commented 1 year ago

hi

TOBIAS_snakemake install was working fine. I updated my install this week and now I am getting this error

SystemExit in file /net/hawkins/vol1/home/arpitm/TOBIAS_snakemake/Snakefile, line 143: ERROR: Could not find any files matching filename/pattern: data/Bcell.bam File "/net/hawkins/vol1/home/arpitm/TOBIAS_snakemake/Snakefile", line 143, in File "/net/hawkins/vol1/home/arpitm/miniconda3/envs/tobias_snakemake_env/lib/python3.7/_sitebuiltins.py", line 26, in call

bioarpit1 commented 1 year ago

issue res

bioarpit1 commented 1 year ago

issue resolved by reinstallilng with mamba