Input to activator/repressor prediction

loosolab / jlu-bda-2020

Code repository for the JLU practical in Biodatenanalyse in winter 2020/2021

MIT License

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Input to activator/repressor prediction #18

Closed msbentsen closed 3 years ago

msbentsen commented 3 years ago

How are you planning on setting up input/output parameters in this script? Right now, I still see it being hardcoded: https://github.com/loosolab/jlu-bda-2020/blob/1b5272387243e01fe4bfd2d0bf01460af1875d20/components_fit.py#L247-L249

Also, should n_components = 15 always be hardcoded like that, or is it something that the user might play with to fine-tune the results? Please push your current work!

JonnyCodewalker commented 3 years ago

This code has been removed in the latest release. It was just used for internal testing.