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Definition: Cofactors are small, inorganic, or organic molecules that are loosely bound to the enzyme. They can be metal ions (inorganic cofactors) or organic molecules (organic cofactors or coenzymes).
Binding: Cofactors are not tightly bound to the enzyme's structure and can be easily dissociated from the enzyme.
Role: Cofactors participate in catalysis by providing chemical groups that the enzyme cannot provide on its own. They may assist in substrate binding, transfer functional groups, or participate in redox reactions.
Examples: Metal ions like Mg²⁺ and Zn²⁺ are inorganic cofactors. Coenzymes like NAD⁺, FAD, and coenzyme A (CoA) are organic cofactors.
Definition: Prosthetic groups are tightly and permanently attached to the enzyme. They are often organic molecules, but unlike coenzymes, they are not readily released from the enzyme under normal physiological conditions.
Binding: Prosthetic groups are tightly bound to the enzyme's structure and are necessary for the enzyme's function. They are a permanent part of the enzyme's structure.
Role: Prosthetic groups play a crucial role in the catalytic activity of the enzyme. They can participate directly in the catalytic mechanism or assist in stabilizing the enzyme's active conformation.
Examples: Heme in hemoglobin and myoglobin, flavin mononucleotide (FMN), and flavin adenine dinucleotide (FAD) in certain dehydrogenases, and biotin in carboxylase enzymes are examples of prosthetic groups.
In summary, the key difference lies in the strength of association with the enzyme: cofactors are loosely bound and can be released, while prosthetic groups are tightly bound and are a permanent part of the enzyme's structure. Both play vital roles in enzyme catalysis and are essential for various biological processes in living organisms.
When designating a type strain, it is crucial to consider several factors to ensure its representativeness and reliability as a reference for the species. Here are key considerations:
The type strain should be representative of the broader characteristics of the species. It should possess typical features that help define and distinguish the species from others.
The selected strain should have diagnostic features that are consistent with the proposed taxonomic description. These features could include morphological traits, biochemical properties, and genetic markers.
The type strain should be consistent in its characteristics, and researchers should ensure that it maintains these features over time. This ensures reliability and reproducibility in subsequent studies.
While being representative, the type strain should also have features that differentiate it from other related species. This distinctiveness helps in clear species identification.
The type strain is typically deposited in a recognized culture collection. This provides a permanent and accessible reference point for researchers worldwide.
The process of selecting and designating a type strain is thoroughly documented in a scientific publication. This publication includes detailed information about the strain's characteristics, its source, and the rationale for its selection.
Co occurence - define this in ten mere of Katie is talking about
This a list of vocabulary I stumbled upon and should remember from time to time.