Add linting and run ruff

[codecov-commenter]

Codecov Report

Patch coverage: 100.00% and project coverage change: -0.03 :warning:

Comparison is base (38c1be7) 96.72% compared to head (a163dc3) 96.69%.

:exclamation: Current head a163dc3 differs from pull request most recent head 4905840. Consider uploading reports for the commit 4905840 to get more accurate results

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Additional details and impacted files

```diff @@ Coverage Diff @@ ## main #84 +/- ## ========================================== - Coverage 96.72% 96.69% -0.03% ========================================== Files 16 14 -2 Lines 580 575 -5 ========================================== - Hits 561 556 -5 Misses 19 19 ``` | [Impacted Files](https://codecov.io/gh/lowe-lab-ucl/arboretum/pull/84?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None) | Coverage Δ | | |---|---|---| | [napari\_arboretum/\_tests/test\_dock\_widget.py](https://codecov.io/gh/lowe-lab-ucl/arboretum/pull/84?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-bmFwYXJpX2FyYm9yZXR1bS9fdGVzdHMvdGVzdF9kb2NrX3dpZGdldC5weQ==) | `100.00% <ø> (ø)` | | | [napari\_arboretum/\_\_init\_\_.py](https://codecov.io/gh/lowe-lab-ucl/arboretum/pull/84?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-bmFwYXJpX2FyYm9yZXR1bS9fX2luaXRfXy5weQ==) | `50.00% <100.00%> (-21.43%)` | :arrow_down: | | [napari\_arboretum/\_hookimpls.py](https://codecov.io/gh/lowe-lab-ucl/arboretum/pull/84?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-bmFwYXJpX2FyYm9yZXR1bS9faG9va2ltcGxzLnB5) | `66.66% <100.00%> (ø)` | | | [napari\_arboretum/\_tests/test\_graph.py](https://codecov.io/gh/lowe-lab-ucl/arboretum/pull/84?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-bmFwYXJpX2FyYm9yZXR1bS9fdGVzdHMvdGVzdF9ncmFwaC5weQ==) | `100.00% <100.00%> (ø)` | | | [napari\_arboretum/\_tests/test\_plugin.py](https://codecov.io/gh/lowe-lab-ucl/arboretum/pull/84?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-bmFwYXJpX2FyYm9yZXR1bS9fdGVzdHMvdGVzdF9wbHVnaW4ucHk=) | `100.00% <100.00%> (ø)` | | | [napari\_arboretum/\_tests/test\_sample\_data.py](https://codecov.io/gh/lowe-lab-ucl/arboretum/pull/84?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-bmFwYXJpX2FyYm9yZXR1bS9fdGVzdHMvdGVzdF9zYW1wbGVfZGF0YS5weQ==) | `100.00% <100.00%> (ø)` | | | [napari\_arboretum/graph.py](https://codecov.io/gh/lowe-lab-ucl/arboretum/pull/84?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-bmFwYXJpX2FyYm9yZXR1bS9ncmFwaC5weQ==) | `100.00% <100.00%> (ø)` | | | [napari\_arboretum/plugin.py](https://codecov.io/gh/lowe-lab-ucl/arboretum/pull/84?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-bmFwYXJpX2FyYm9yZXR1bS9wbHVnaW4ucHk=) | `89.55% <100.00%> (+0.48%)` | :arrow_up: | | [napari\_arboretum/sample/sample\_data.py](https://codecov.io/gh/lowe-lab-ucl/arboretum/pull/84?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-bmFwYXJpX2FyYm9yZXR1bS9zYW1wbGUvc2FtcGxlX2RhdGEucHk=) | `100.00% <100.00%> (ø)` | | | [napari\_arboretum/tree.py](https://codecov.io/gh/lowe-lab-ucl/arboretum/pull/84?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-bmFwYXJpX2FyYm9yZXR1bS90cmVlLnB5) | `100.00% <100.00%> (ø)` | | | ... and [4 more](https://codecov.io/gh/lowe-lab-ucl/arboretum/pull/84?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None) | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None)

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[p-j-smith]

Tests are passing!

It looks like linting if failing because there is no token in secrets for access to sourcery, although I can't check because I'm not an admin.

And the napari hub preview page is complaining about ModuleNotFoundError: No module named 'npe2' - does this need to be installed in the workflow?

[paddyroddy]

Tests are passing!

It looks like linting if failing because there is no token in secrets for access to sourcery, although I can't check because I'm not an admin.

And the napari hub preview page is complaining about ModuleNotFoundError: No module named 'npe2' - does this need to be installed in the workflow?

Didn't mean to add sourcery, have removed. Will look into the npe2 bit.

[deprecated-napari-hub-preview-bot[bot]]

Preview page for your plugin is ready here: https://preview.napari-hub.org/lowe-lab-ucl/arboretum/84 Updated: 2023-03-06T13:57:11.934434

[paddyroddy]

Plugin preview working, changing the version to @v0.1