lpantano
commented
6 years ago Hi,
Can you tell me wha Java version are you using?
As well, the right tool has to be downloaded from here:
https://github.com/lpantano/seqbuster/raw/miraligner/modules/miraligner/miraligner.jar https://github.com/lpantano/seqbuster/raw/miraligner/modules/miraligner/miraligner.jar
This version needs Java 8 to work.
Cheers
On May 29, 2018, at 11:27 PM, palbioinfor notifications@github.com wrote:
I am getting 'ArrayIndexOutOfBoundsException: 1 error with miraligner. Also sometimes it is "Javalangerror" too.
Can someone help me with that. detail of the error is-
Format is not fasta, guessing tabular species found Go to mapping... Mismatches: 1 Trimming: 3 Addition: 3 Species: hsa Tue May 29 23:12:13 EDT 2018
Reading reads Exception in thread "main" java.lang.ArrayIndexOutOfBoundsException: 1 at miraligner.tools.getseq(tools.java:98) at miraligner.map.readseq(map.java:87) at miraligner.Main.main(Main.java:85)
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palbioinfor
I am getting 'ArrayIndexOutOfBoundsException: 1 error with miraligner. Also sometimes it is "Javalangerror" too.
Can someone help me with that. detail of the error is-
Format is not fasta, guessing tabular species found Go to mapping... Mismatches: 1 Trimming: 3 Addition: 3 Species: hsa Tue May 29 23:12:13 EDT 2018
Reading reads Exception in thread "main" java.lang.ArrayIndexOutOfBoundsException: 1 at miraligner.tools.getseq(tools.java:98) at miraligner.map.readseq(map.java:87) at miraligner.Main.main(Main.java:85)