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lskatz / annapotater

Quick and dirty SNP annotator
GNU General Public License v3.0
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Separate SNPs in same codon #7

Open tseemann opened 1 year ago

tseemann commented 1 year ago

Does this get handled properly?

pos 1 is A -> C pos 3 is G -> T

So we have a codon which has two base changes in it If you treat each SNP above independently then both consequences will be wong

eg. ATG -> CTT

lskatz commented 1 year ago

I think this is a really good topic, but I might need some time to think on how to implement it.