lskatz / mashtree

:deciduous_tree: Create a tree using Mash distances
GNU General Public License v3.0
148 stars 21 forks source link

Mashtree v1.4.6 is available at conda but its still showing v0.37 #84

Open MHassanSaeed opened 9 months ago

MHassanSaeed commented 9 months ago

Hi there,

I am installing Mashtree with conda but its version is outdated, although its says v1.4.6 here: https://anaconda.org/bioconda/mashtree

What could be an issue here?

Best, Hassan

lskatz commented 9 months ago

Please provide more information on the steps that you took to get here, because yes it is working

lskatz commented 9 months ago

Here is the bug reporting template, for reference:

Describe the bug A clear and concise description of what the bug is.

To Reproduce Steps to reproduce the behavior:

  1. Go to '...'
  2. Click on '....'
  3. Scroll down to '....'
  4. See error

Expected behavior A clear and concise description of what you expected to happen.

Screenshots If applicable, add screenshots to help explain your problem.

Desktop (please complete the following information):

Additional context Add any other context about the problem here.

MHassanSaeed commented 9 months ago

Hi Iskatz,

I used these two commands to install mashtree:

conda install -c bioconda mashtree

conda install -c "bioconda/label/cf201901" mashtree

It is working fine but mashtree_bootstrap.pl doesn't works.

The version of mashtree mentioned at the site is v1.4.6 but mashtree --version shows its 0.37

Thanks

lskatz commented 9 months ago

Although I appreciate the conda installation, I do not support it here. Please read the documentation on installation and let me know if you were able to install it. https://github.com/lskatz/mashtree/blob/master/docs/INSTALL.md