lubianat / ann

A repository for brainstorming and prototyping ideas related to the eLifeSprint project Annotate them all (https://sprint.elifesciences.org/annotate-them-all/)
Apache License 2.0
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Take inspiration from Monarch Text Annotator #32

Open lubianat opened 3 years ago

lubianat commented 3 years ago

The Monarch Initiative aims at integrating many different ontologies, so to organize biomedical knowledge and enable discovery & precision medicine.

They have a text annotator which already matches many terms in a free text to varied biological entities: https://monarchinitiative.org/tools/text-annotate

I would imagine that the code is available somewhere, even though I would not know exactly where.