CRISPRessoPool update and debug features

lucapinello / CRISPResso

Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data

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CRISPRessoPool update and debug features #31

Closed kclem closed 6 years ago

kclem commented 6 years ago

Implemented parameter 'bowtie2_options_string' in CRISPRessoPooled for changing parameters passed to bowtie2 Added debug functionality to print most common unaligned reads in cases where less than half of reads align in CRISPRessoPooled