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ludvigla / semla

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Error with LoadImages and MapFeaturesSummary #7

Open AlinaO90 opened 1 year ago

AlinaO90 commented 1 year ago

Hi,

I am following one of the tutorials on the Semla website and I am having trouble using the image features from the package.

When I run LoadImages I get the following error:

image

In the img column of the infoTable tibble, I do have 'detected_tissue_image.jpg' but I have tried even with the tissue_lowres_image.png and I get the same error.

Additionally, when I try to use MapFeatureSummary I get this error:

image

I am using cytassist images, I am using R 4.1.1 and here is my sessionInfo()

image

Do you know what could be going wrong here? Thanks

lfranzen commented 7 months ago

Hi! First of all, apologies for the very late response, we have seen you issue but are not really able to recreate it and have therefore not been able to adress it. Did you manage to find a solution to it in the end or does it still give you errors?