Use CLR transform for composition baseline

lueckenlab / patpy

BSD 3-Clause "New" or "Revised" License

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Use CLR transform for composition baseline #73

Open VladimirShitov opened 1 month ago

VladimirShitov commented 1 month ago

Description of feature

Have an argument for transforming compositions with centered log-ratio transformation. This is a proper way to calculate distances for compositional data. I haven't found this transformation in popular packages, but it is easy to implement