[x] Simulation Study using data from test-sim-6-7-22:
use iMCMC, K=10, L=3
use parallel tempering with temperatures {1, 1.003, 1.006, 1.01}
True Z = {Z1, Z2, Z3}
With missing data, and without missing data
Phi=(0, 1, 10, 25)
Points 3-4 imply that there are 6 datasets. Point 5 suggests we need to analyze those 6 datasets 4 times (with different phi). That's 24 runs. Each run using 4 cores. If I use 24 cores on the server, that means I can do 6 runs (with PT using 4 cores) at a time. And I would need to iterate 4 times. Probably looping over phi. If one run takes 15 hours, then *total run time = 15 4 = 60 hours**.
[x] Real Data Analysis:
use iMCMC, K=20, L=5
use parallel tempering with temperatures {1, 1.003, 1.006, 1.01}
Phi=(0, 1, 10, 25)
That's 4 runs, each using 4 cores. This requires 16 cores. So, this can be run in parallel.
Points 3-4 imply that there are 6 datasets. Point 5 suggests we need to analyze those 6 datasets 4 times (with different phi). That's 24 runs. Each run using 4 cores. If I use 24 cores on the server, that means I can do 6 runs (with PT using 4 cores) at a time. And I would need to iterate 4 times. Probably looping over phi. If one run takes 15 hours, then *total run time = 15 4 = 60 hours**.
That's 4 runs, each using 4 cores. This requires 16 cores. So, this can be run in parallel.