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luismurao / ntbox

Testing stable functions of nichetoolbox
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Error in FUN: invalid multibyte character in parser at line 23 #12

Open leechaowen opened 2 years ago

leechaowen commented 2 years ago

HI, Could you mind take your time view this issue? How to fix it? Thanks.

> run_ntbox()

|----------------------------------------------------------------|
|      **** Welcome to nichetoolbox version 0.6.5.5 ****         |
|----------------------------------------------------------------|
|      Looking for additional nichetoolbox dependencies          |
|      Note that the first time it can take few seconds          |
|----------------------------------------------------------------|

Your system is ready to build packages!

Listening on http://127.0.0.1:7552
This Font Awesome icon ('folder-o') does not exist:
* if providing a custom `html_dependency` these `name` checks can 
  be deactivated with `verify_fa = FALSE`
Warning: Error in FUN: invalid multibyte character in parser at line 23
  75: FUN
  73: lapply
  72: sapply

> session_info()
- Session info ------------------------------------------------------------------------------------------------------------------------------------
 setting  value
 version  R version 4.1.1 (2021-08-10)
 os       Windows 10 x64 (build 19042)
 system   x86_64, mingw32
 ui       RStudio
 language (EN)
 collate  Chinese (Simplified)_China.936
 ctype    Chinese (Simplified)_China.936
 tz       Asia/Taipei
 date     2021-12-14
 rstudio  2021.09.0+351 Ghost Orchid (desktop)
 pandoc   2.14.0.3 @ C:/Program Files/RStudio/bin/pandoc/ (via rmarkdown)

- Packages ----------------------------------------------------------------------------------------------------------------------------------------
 package        * version  date (UTC) lib source
 abind            1.4-5    2016-07-21 [1] CRAN (R 4.1.1)
 ade4           * 1.7-18   2021-09-16 [1] CRAN (R 4.1.2)
 assertthat       0.2.1    2019-03-21 [1] CRAN (R 4.1.1)
 bit              4.0.4    2020-08-04 [1] CRAN (R 4.1.1)
 bit64            4.0.5    2020-08-30 [1] CRAN (R 4.1.1)
 blob             1.2.2    2021-07-23 [1] CRAN (R 4.1.1)
 bslib            0.3.1    2021-10-06 [1] CRAN (R 4.1.2)
 cachem           1.0.6    2021-08-19 [1] CRAN (R 4.1.2)
 callr            3.7.0    2021-04-20 [1] CRAN (R 4.1.1)
 car            * 3.0-12   2021-11-06 [1] CRAN (R 4.1.2)
 carData        * 3.0-4    2020-05-22 [1] CRAN (R 4.1.1)
 chron            2.3-56   2020-08-18 [1] CRAN (R 4.1.2)
 cli              3.1.0    2021-10-27 [1] CRAN (R 4.1.2)
 cluster        * 2.1.2    2021-04-17 [2] CRAN (R 4.1.1)
 codetools        0.2-18   2020-11-04 [2] CRAN (R 4.1.1)
 colorspace       2.0-2    2021-06-24 [1] CRAN (R 4.1.1)
 conditionz       0.1.0    2019-04-24 [1] CRAN (R 4.1.2)
 corrplot       * 0.92     2021-11-18 [1] CRAN (R 4.1.2)
 crayon           1.4.2    2021-10-29 [1] CRAN (R 4.1.2)
 crosstalk        1.2.0    2021-11-04 [1] CRAN (R 4.1.2)
 curl             4.3.2    2021-06-23 [1] CRAN (R 4.1.1)
 data.table       1.14.2   2021-09-27 [1] CRAN (R 4.1.1)
 DBI              1.1.1    2021-01-15 [1] CRAN (R 4.1.1)
 desc             1.4.0    2021-09-28 [1] CRAN (R 4.1.2)
 devtools       * 2.4.3    2021-11-30 [1] CRAN (R 4.1.2)
 digest           0.6.28   2021-09-23 [1] CRAN (R 4.1.1)
 dismo          * 1.3-5    2021-10-11 [1] CRAN (R 4.1.2)
 dotCall64      * 1.0-1    2021-02-11 [1] CRAN (R 4.1.2)
 dplyr          * 1.0.7    2021-06-18 [1] CRAN (R 4.1.1)
 DT               0.20     2021-11-15 [1] CRAN (R 4.1.2)
 dygraphs       * 1.1.1.6  2018-07-11 [1] CRAN (R 4.1.2)
 ellipsis         0.3.2    2021-04-29 [1] CRAN (R 4.1.1)
 evaluate         0.14     2019-05-28 [1] CRAN (R 4.1.1)
 fansi            0.5.0    2021-05-25 [1] CRAN (R 4.1.1)
 fastmap          1.1.0    2021-01-25 [1] CRAN (R 4.1.1)
 fields         * 13.3     2021-10-30 [1] CRAN (R 4.1.2)
 fontawesome      0.2.2    2021-07-02 [1] CRAN (R 4.1.2)
 foreign          0.8-81   2020-12-22 [2] CRAN (R 4.1.1)
 fs               1.5.0    2020-07-31 [1] CRAN (R 4.1.1)
 future           1.23.0   2021-10-31 [1] CRAN (R 4.1.2)
 generics         0.1.1    2021-10-25 [1] CRAN (R 4.1.2)
 ggplot2          3.3.5    2021-06-25 [1] CRAN (R 4.1.1)
 globals          0.14.0   2020-11-22 [1] CRAN (R 4.1.1)
 glue             1.4.2    2020-08-27 [1] CRAN (R 4.1.1)
 googleVis      * 0.6.10   2021-02-19 [1] CRAN (R 4.1.2)
 gridExtra        2.3      2017-09-09 [1] CRAN (R 4.1.1)
 gsubfn         * 0.7      2018-03-16 [1] CRAN (R 4.1.2)
 gtable           0.3.0    2019-03-25 [1] CRAN (R 4.1.1)
 hexbin           1.28.2   2021-01-08 [1] CRAN (R 4.1.2)
 htmltools        0.5.2    2021-08-25 [1] CRAN (R 4.1.1)
 htmlwidgets      1.5.4    2021-09-08 [1] CRAN (R 4.1.1)
 httpuv           1.6.3    2021-09-09 [1] CRAN (R 4.1.2)
 httr             1.4.2    2020-07-20 [1] CRAN (R 4.1.1)
 jpeg             0.1-9    2021-07-24 [1] CRAN (R 4.1.1)
 jquerylib        0.1.4    2021-04-26 [1] CRAN (R 4.1.1)
 jsonlite         1.7.2    2020-12-09 [1] CRAN (R 4.1.1)
 knitr          * 1.36     2021-09-29 [1] CRAN (R 4.1.1)
 later            1.3.0    2021-08-18 [1] CRAN (R 4.1.2)
 lattice        * 0.20-44  2021-05-02 [2] CRAN (R 4.1.1)
 latticeExtra     0.6-29   2019-12-19 [1] CRAN (R 4.1.2)
 lazyeval         0.2.2    2019-03-15 [1] CRAN (R 4.1.1)
 leaflet        * 2.0.4.1  2021-01-07 [1] CRAN (R 4.1.1)
 leaflet.extras * 1.0.0    2018-04-21 [1] CRAN (R 4.1.2)
 lifecycle        1.0.1    2021-09-24 [1] CRAN (R 4.1.1)
 listenv          0.8.0    2019-12-05 [1] CRAN (R 4.1.2)
 lubridate        1.8.0    2021-10-07 [1] CRAN (R 4.1.1)
 magrittr       * 2.0.1    2020-11-17 [1] CRAN (R 4.1.1)
 mapproj          1.2.7    2020-02-03 [1] CRAN (R 4.1.2)
 maps           * 3.4.0    2021-09-25 [1] CRAN (R 4.1.2)
 maptools       * 1.1-2    2021-09-07 [1] CRAN (R 4.1.2)
 MASS           * 7.3-54   2021-05-03 [2] CRAN (R 4.1.1)
 Matrix           1.3-4    2021-06-01 [2] CRAN (R 4.1.1)
 memoise          2.0.1    2021-11-26 [1] CRAN (R 4.1.2)
 mgcv           * 1.8-36   2021-06-01 [2] CRAN (R 4.1.1)
 mime             0.12     2021-09-28 [1] CRAN (R 4.1.1)
 mnormt           2.0.2    2020-09-01 [1] CRAN (R 4.1.1)
 munsell          0.5.0    2018-06-12 [1] CRAN (R 4.1.1)
 nlme           * 3.1-152  2021-02-04 [2] CRAN (R 4.1.1)
 ntbox          * 0.6.5.5  2021-12-14 [1] Github (luismurao/ntbox@ae58069)
 oai              0.3.2    2021-05-13 [1] CRAN (R 4.1.2)
 parallelly       1.29.0   2021-11-21 [1] CRAN (R 4.1.2)
 pillar           1.6.4    2021-10-18 [1] CRAN (R 4.1.2)
 pkgbuild         1.3.0    2021-12-09 [1] CRAN (R 4.1.2)
 pkgconfig        2.0.3    2019-09-22 [1] CRAN (R 4.1.1)
 pkgload          1.2.4    2021-11-30 [1] CRAN (R 4.1.2)
 plyr           * 1.8.6    2020-03-03 [1] CRAN (R 4.1.1)
 png            * 0.1-7    2013-12-03 [1] CRAN (R 4.1.1)
 prettyunits      1.1.1    2020-01-24 [1] CRAN (R 4.1.1)
 processx         3.5.2    2021-04-30 [1] CRAN (R 4.1.1)
 promises         1.2.0.1  2021-02-11 [1] CRAN (R 4.1.2)
 proto          * 1.0.0    2016-10-29 [1] CRAN (R 4.1.2)
 ps               1.6.0    2021-02-28 [1] CRAN (R 4.1.1)
 psych          * 2.1.9    2021-09-22 [1] CRAN (R 4.1.2)
 purrr            0.3.4    2020-04-17 [1] CRAN (R 4.1.1)
 R6               2.5.1    2021-08-19 [1] CRAN (R 4.1.1)
 raster         * 3.5-2    2021-10-11 [1] CRAN (R 4.1.1)
 rasterVis      * 0.51.1   2021-11-20 [1] CRAN (R 4.1.2)
 rbison           1.0.0    2020-06-08 [1] CRAN (R 4.1.2)
 RColorBrewer   * 1.1-2    2014-12-07 [1] CRAN (R 4.1.1)
 Rcpp           * 1.0.7    2021-07-07 [1] CRAN (R 4.1.1)
 rebird           1.3.0    2021-09-20 [1] CRAN (R 4.1.2)
 remotes          2.4.2    2021-11-30 [1] CRAN (R 4.1.2)
 rgbif            3.6.0    2021-06-02 [1] CRAN (R 4.1.2)
 rgdal          * 1.5-27   2021-09-16 [1] CRAN (R 4.1.2)
 rgeos          * 0.5-8    2021-09-22 [1] CRAN (R 4.1.2)
 rgl            * 0.108.3  2021-11-21 [1] CRAN (R 4.1.2)
 rglwidget      * 0.2.1    2016-08-26 [1] CRAN (R 4.1.2)
 ridigbio         0.3.5    2017-02-16 [1] CRAN (R 4.1.2)
 RJSONIO          1.3-1.6  2021-09-16 [1] CRAN (R 4.1.1)
 rlang            0.4.11   2021-04-30 [1] CRAN (R 4.1.1)
 rmarkdown      * 2.11     2021-09-14 [1] CRAN (R 4.1.1)
 rprojroot        2.0.2    2020-11-15 [1] CRAN (R 4.1.1)
 RSQLite        * 2.2.9    2021-12-06 [1] CRAN (R 4.1.2)
 rstudioapi       0.13     2020-11-12 [1] CRAN (R 4.1.1)
 rvertnet         0.8.2    2021-05-13 [1] CRAN (R 4.1.2)
 sass             0.4.0    2021-05-12 [1] CRAN (R 4.1.2)
 scales           1.1.1    2020-05-11 [1] CRAN (R 4.1.1)
 sessioninfo      1.2.2    2021-12-06 [1] CRAN (R 4.1.2)
 shiny          * 1.7.1    2021-10-02 [1] CRAN (R 4.1.2)
 shinyBS        * 0.61     2015-03-31 [1] CRAN (R 4.1.2)
 shinyFiles     * 0.9.1    2021-11-10 [1] CRAN (R 4.1.2)
 shinyjs        * 2.0.0    2020-09-09 [1] CRAN (R 4.1.2)
 shinysky       * 0.1.3    2021-12-14 [1] Github (AnalytixWare/ShinySky@695b4b9)
 shinythemes    * 1.2.0    2021-01-25 [1] CRAN (R 4.1.2)
 sp             * 1.4-5    2021-01-10 [1] CRAN (R 4.1.1)
 spam           * 2.7-0    2021-06-25 [1] CRAN (R 4.1.2)
 spocc          * 1.2.0    2021-01-05 [1] CRAN (R 4.1.2)
 sqldf          * 0.4-11   2017-06-28 [1] CRAN (R 4.1.2)
 stringi          1.7.5    2021-10-04 [1] CRAN (R 4.1.1)
 stringr        * 1.4.0    2019-02-10 [1] CRAN (R 4.1.1)
 terra            1.4-11   2021-10-11 [1] CRAN (R 4.1.1)
 testthat         3.1.1    2021-12-03 [1] CRAN (R 4.1.2)
 tibble           3.1.5    2021-09-30 [1] CRAN (R 4.1.1)
 tidyselect       1.1.1    2021-04-30 [1] CRAN (R 4.1.1)
 tmvnsim          1.0-2    2016-12-15 [1] CRAN (R 4.1.1)
 usethis        * 2.1.5    2021-12-09 [1] CRAN (R 4.1.2)
 utf8             1.2.2    2021-07-24 [1] CRAN (R 4.1.1)
 uuid             0.1-4    2020-02-26 [1] CRAN (R 4.1.1)
 V8             * 3.6.0    2021-11-10 [1] CRAN (R 4.1.2)
 vctrs            0.3.8    2021-04-29 [1] CRAN (R 4.1.1)
 viridis        * 0.6.2    2021-10-13 [1] CRAN (R 4.1.1)
 viridisLite    * 0.4.0    2021-04-13 [1] CRAN (R 4.1.1)
 wellknown        0.7.4    2021-05-25 [1] CRAN (R 4.1.2)
 whisker          0.4      2019-08-28 [1] CRAN (R 4.1.2)
 withr            2.4.3    2021-11-30 [1] CRAN (R 4.1.2)
 wk               0.5.0    2021-07-13 [1] CRAN (R 4.1.2)
 xfun             0.26     2021-09-14 [1] CRAN (R 4.1.1)
 XML            * 3.99-0.8 2021-09-17 [1] CRAN (R 4.1.1)
 xml2             1.3.2    2020-04-23 [1] CRAN (R 4.1.1)
 xtable           1.8-4    2019-04-21 [1] CRAN (R 4.1.2)
 yaml             2.2.1    2020-02-01 [1] CRAN (R 4.1.1)
 zoo              1.8-9    2021-03-09 [1] CRAN (R 4.1.2)

---------------------------------------------------------------------------------------------------------------------------------------------------
>

image

Songxingjiang commented 2 years ago

I encountered the same problem

belmacedo commented 2 years ago

HI, Could you mind take your time view this issue? How to fix it? Thanks.

run_ntbox() ---------------------------------------------------------------- Welcome to nichetoolbox version 0.6.5.5
Looking for additional nichetoolbox dependencies
Note that the first time it can take few seconds
----------------------------------------------------------------

Your system is ready to build packages! Creating a generic function for ‘toJSON’ from package ‘jsonlite’ in package ‘googleVis’

Attaching package: ‘shinysky’

The following object is masked from ‘package:shiny’:

actionButton

Listening on http://127.0.0.1:7755 Warning: Error in dots_list: object 'materials' not found 89: dotslist 88: div 87: tabPanel 86: bslib::nav 85: tabPanel image

luismurao commented 2 years ago

@belmacedo The issue is fixed now. Try to install ntbox again. Best Luis

paitanqu commented 2 years ago

Try to install ntbox again, I also encountered the same problem.

lcsjunior commented 2 years ago

@paitanqu We also encountered this issue but in Classic R GUI. However, in R Studio it was ok for Linux and Windows. Test the installation step by step in R Studio.