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luispedro / waldo

Waldo Project
MIT License
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Search by Uniprot ID #13

Closed luispedro closed 14 years ago

magsol commented 14 years ago

Something is wrong here: no hits are turning up when searching for Uniprot, likely due to the implicit back-end conversion of all database-specific IDs to Ensembl IDs. Will investigate and am marking this as a "bug" as well.

magsol commented 14 years ago

Yeahhh...this is the only item inserted into the translations table for Uniprot:

170330|uniprot:name|2AAA_MOUSE|ensembl:transcript_id|ENSMUST00000007708 170332|uniprot:name|2AAA_MOUSE|ensembl:peptide_id|ENSMUSP00000007708 170334|uniprot:name|2AAA_MOUSE|ensembl:gene_id|ENSMUSG00000007564

And the other way around:

170329|ensembl:transcript_id|ENSMUST00000007708|uniprot:name|2AAA_MOUSE 170331|ensembl:peptide_id|ENSMUSP00000007708|uniprot:name|2AAA_MOUSE 170333|ensembl:gene_id|ENSMUSG00000007564|uniprot:name|2AAA_MOUSE

Not quite clear why yet...will update.

magsol commented 14 years ago

Heh...found it.