luizirber / 2020-cami

Preparing sourmash for CAMI 2 evaluations
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CAMI profile loader with xarray #2

Open luizirber opened 4 years ago

luizirber commented 4 years ago

While the CAMI profiling format is a TSV with comments, the comments are not available if you use pandas to parse and load it. It might be useful to write an xarray loader and save the comments as metadata, so it is still available during exploratory analysis without having to create a thin wrapper around a Pandas dataframe.

cc @dkoslicki