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luntergroup / octopus

Bayesian haplotype-based mutation calling
MIT License
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conda installation #189

Closed KamilSJaron closed 3 years ago

KamilSJaron commented 3 years ago

Hi there, I somehow run in exactly the same problem as described in #27 #34 #39 and presumably resolved in the conda issue. 

octopus -v
Illegal instruction (core dumped)

I tried to install it using conda install -c conda-forge -c bioconda octopus in a fresh conda environment (a bit older 4.7.12) running on Debian GNU/Linux 9 (stretch).

The version of octopus that was installed was

octopus            bioconda/linux-64::octopus-0.7.4-h40a150c_0

I am not sure what went wrong and not even where to start with debugging

dancooke commented 3 years ago

Hey, I think you're probably running into the same issue as #180 (see my comment).

KamilSJaron commented 3 years ago

Yep, that's going to be the problem. I will probs build it from the source then. Thanks!