Describe the bug
Try to build octopus in docker without building local dependencies. The error happen with building the cancer_caller.cpp.o. Please see the error message in the attached [snapshot.]()
.
Please let me know how I can fix this. Thank you in advance.
Simo
Version
$ octopus --version
v0.7.4
$ gcc -v
9.3.0
Boost=1.70
cmake=3.18.2
htslib=1.13
python=3.8.8
Command
Command line to install octopus:
$ ./install.py --forests --threads 1
Command line to run octopus:
$ NA
Additional context
Add any other context about the problem here, e.g.
Reference [e.g. hg19]. Please provide link to fasta if atypical.
Describe the bug Try to build octopus in docker without building local dependencies. The error happen with building the
.
cancer_caller.cpp.o
. Please see the error message in the attached [snapshot.]()Please let me know how I can fix this. Thank you in advance.
Simo
Version
Boost=1.70 cmake=3.18.2 htslib=1.13 python=3.8.8
Command Command line to install octopus:
Command line to run octopus:
Additional context Add any other context about the problem here, e.g.