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luoyunan / DTINet

A Network Integration Approach for Drug-Target Interaction Prediction
GNU General Public License v3.0
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Where does the DTINet outputs the result? #20

Open pasangpythondiary opened 2 years ago

pasangpythondiary commented 2 years ago

does the DTINet generates new xlsx file after running run_DTINet file? because i am not getting any new DTI file. i am just getting AUROC and AUPRC value after running run_DTI file.

luoyunan commented 1 year ago

Hi, You can extract the predicted values from the Zscoe matrix, as did in our code https://github.com/luoyunan/DTINet/blob/725c5d04db5cc342eb4d84bce2872db0cfd6da8c/src/DTINet.m#L33

We recently released PyDTINet, a python version of DTINet, where you can easily get the prediction by calling a .predict() function. See examples here.