lynaghk / clj-liblinear

A Clojure wrapper for LIBLINEAR, a linear support vector machine library
http://keminglabs.com/clj-liblinear/
Eclipse Public License 1.0
28 stars 9 forks source link

using clj-liblinear doesn't seem to work or compile #3

Closed jtoy closed 10 years ago

jtoy commented 11 years ago

Exception in thread "main" java.lang.IllegalArgumentException: Malformed member expression, compiling:(clj_liblinear/core.clj:49:5) at clojure.lang.Compiler.analyzeSeq(Compiler.java:6567) at clojure.lang.Compiler.analyze(Compiler.java:6361) at clojure.lang.Compiler.analyze(Compiler.java:6322) at clojure.lang.Compiler$AssignExpr$Parser.parse(Compiler.java:566) at clojure.lang.Compiler.analyzeSeq(Compiler.java:6560) at clojure.lang.Compiler.analyze(Compiler.java:6361) at clojure.lang.Compiler.analyze(Compiler.java:6322) at clojure.lang.Compiler$BodyExpr$Parser.parse(Compiler.java:5708) at clojure.lang.Compiler.analyzeSeq(Compiler.java:6560) at clojure.lang.Compiler.analyze(Compiler.java:6361) at clojure.lang.Compiler.analyzeSeq(Compiler.java:6548) at clojure.lang.Compiler.analyze(Compiler.java:6361) at clojure.lang.Compiler.analyze(Compiler.java:6322) at clojure.lang.Compiler$BodyExpr$Parser.parse(Compiler.java:5708) at clojure.lang.Compiler$LetExpr$Parser.parse(Compiler.java:6009) at clojure.lang.Compiler.analyzeSeq(Compiler.java:6560) at clojure.lang.Compiler.analyze(Compiler.java:6361) at clojure.lang.Compiler.analyzeSeq(Compiler.java:6548) at clojure.lang.Compiler.analyze(Compiler.java:6361) at clojure.lang.Compiler.analyze(Compiler.java:6322) at clojure.lang.Compiler$BodyExpr$Parser.parse(Compiler.java:5708) at clojure.lang.Compiler$LetExpr$Parser.parse(Compiler.java:6009) at clojure.lang.Compiler.analyzeSeq(Compiler.java:6560) at clojure.lang.Compiler.analyze(Compiler.java:6361) at clojure.lang.Compiler.analyzeSeq(Compiler.java:6548) at clojure.lang.Compiler.analyze(Compiler.java:6361) at clojure.lang.Compiler.analyze(Compiler.java:6322) at clojure.lang.Compiler$BodyExpr$Parser.parse(Compiler.java:5708) at clojure.lang.Compiler$FnMethod.parse(Compiler.java:5139) at clojure.lang.Compiler$FnExpr.parse(Compiler.java:3751) at clojure.lang.Compiler.analyzeSeq(Compiler.java:6558) at clojure.lang.Compiler.analyze(Compiler.java:6361) at clojure.lang.Compiler.analyzeSeq(Compiler.java:6548) at clojure.lang.Compiler.analyze(Compiler.java:6361) at clojure.lang.Compiler.access$100(Compiler.java:37) at clojure.lang.Compiler$DefExpr$Parser.parse(Compiler.java:529) at clojure.lang.Compiler.analyzeSeq(Compiler.java:6560) at clojure.lang.Compiler.analyze(Compiler.java:6361) at clojure.lang.Compiler.analyze(Compiler.java:6322) at clojure.lang.Compiler.compile1(Compiler.java:7148) at clojure.lang.Compiler.compile(Compiler.java:7219) at clojure.lang.RT.compile(RT.java:398) at clojure.lang.RT.load(RT.java:438) at clojure.lang.RT.load(RT.java:411) at clojure.core$load$fn5018.invoke(core.clj:5530) at clojure.core$load.doInvoke(core.clj:5529) at clojure.lang.RestFn.invoke(RestFn.java:408) at clojure.core$load_one.invoke(core.clj:5336) at clojure.core$load_lib$fn4967.invoke(core.clj:5375) at clojure.core$load_lib.doInvoke(core.clj:5374) at clojure.lang.RestFn.applyTo(RestFn.java:142) at clojure.core$apply.invoke(core.clj:619) at clojure.core$load_libs.doInvoke(core.clj:5413) at clojure.lang.RestFn.applyTo(RestFn.java:137) at clojure.core$apply.invoke(core.clj:621) at clojure.core$use.doInvoke(core.clj:5507) at clojure.lang.RestFn.invoke(RestFn.java:408) at interests.stats$loading4910auto.invoke(stats.clj:1) at clojure.lang.AFn.applyToHelper(AFn.java:159) at clojure.lang.AFn.applyTo(AFn.java:151) at clojure.lang.Compiler$InvokeExpr.eval(Compiler.java:3458) at clojure.lang.Compiler.compile1(Compiler.java:7153) at clojure.lang.Compiler.compile1(Compiler.java:7143) at clojure.lang.Compiler.compile(Compiler.java:7219) at clojure.lang.RT.compile(RT.java:398) at clojure.lang.RT.load(RT.java:438) at clojure.lang.RT.load(RT.java:411) at clojure.core$load$fn5018.invoke(core.clj:5530) at clojure.core$load.doInvoke(core.clj:5529) at clojure.lang.RestFn.invoke(RestFn.java:408) at clojure.core$load_one.invoke(core.clj:5336) at clojure.core$load_lib$fn4967.invoke(core.clj:5375) at clojure.core$load_lib.doInvoke(core.clj:5374) at clojure.lang.RestFn.applyTo(RestFn.java:142) at clojure.core$apply.invoke(core.clj:619) at clojure.core$load_libs.doInvoke(core.clj:5413) at clojure.lang.RestFn.applyTo(RestFn.java:137) at clojure.core$apply.invoke(core.clj:621) at clojure.core$use.doInvoke(core.clj:5507) at clojure.lang.RestFn.invoke(RestFn.java:408) at interests.enrichments$loading4910auto.invoke(enrichments.clj:1) at clojure.lang.AFn.applyToHelper(AFn.java:159) at clojure.lang.AFn.applyTo(AFn.java:151) at clojure.lang.Compiler$InvokeExpr.eval(Compiler.java:3458) at clojure.lang.Compiler.compile1(Compiler.java:7153) at clojure.lang.Compiler.compile1(Compiler.java:7143) at clojure.lang.Compiler.compile(Compiler.java:7219) at clojure.lang.RT.compile(RT.java:398) at clojure.lang.RT.load(RT.java:438) at clojure.lang.RT.load(RT.java:411) at clojure.core$load$fn5018.invoke(core.clj:5530) at clojure.core$load.doInvoke(core.clj:5529) at clojure.lang.RestFn.invoke(RestFn.java:408) at clojure.core$load_one.invoke(core.clj:5336) at clojure.core$load_lib$fn4967.invoke(core.clj:5375) at clojure.core$load_lib.doInvoke(core.clj:5374) at clojure.lang.RestFn.applyTo(RestFn.java:142) at clojure.core$apply.invoke(core.clj:619) at clojure.core$load_libs.doInvoke(core.clj:5413) at clojure.lang.RestFn.applyTo(RestFn.java:137) at clojure.core$apply.invoke(core.clj:621) at clojure.core$use.doInvoke(core.clj:5507) at clojure.lang.RestFn.invoke(RestFn.java:408) at interests.users$loading4910auto.invoke(users.clj:1) at clojure.lang.AFn.applyToHelper(AFn.java:159) at clojure.lang.AFn.applyTo(AFn.java:151) at clojure.lang.Compiler$InvokeExpr.eval(Compiler.java:3458) at clojure.lang.Compiler.compile1(Compiler.java:7153) at clojure.lang.Compiler.compile1(Compiler.java:7143) at clojure.lang.Compiler.compile(Compiler.java:7219) at clojure.lang.RT.compile(RT.java:398) at clojure.lang.RT.load(RT.java:438) at clojure.lang.RT.load(RT.java:411) at clojure.core$load$fn5018.invoke(core.clj:5530) at clojure.core$load.doInvoke(core.clj:5529) at clojure.lang.RestFn.invoke(RestFn.java:408) at clojure.core$load_one.invoke(core.clj:5336) at clojure.core$load_lib$fn4967.invoke(core.clj:5375) at clojure.core$load_lib.doInvoke(core.clj:5374) at clojure.lang.RestFn.applyTo(RestFn.java:142) at clojure.core$apply.invoke(core.clj:619) at clojure.core$load_libs.doInvoke(core.clj:5413) at clojure.lang.RestFn.applyTo(RestFn.java:137) at clojure.core$apply.invoke(core.clj:621) at clojure.core$use.doInvoke(core.clj:5507) at clojure.lang.RestFn.invoke(RestFn.java:408) at interests.core$loading4910auto.invoke(core.clj:2) at clojure.lang.AFn.applyToHelper(AFn.java:159) at clojure.lang.AFn.applyTo(AFn.java:151) at clojure.lang.Compiler$InvokeExpr.eval(Compiler.java:3458) at clojure.lang.Compiler.compile1(Compiler.java:7153) at clojure.lang.Compiler.compile1(Compiler.java:7143) at clojure.lang.Compiler.compile(Compiler.java:7219) at clojure.lang.RT.compile(RT.java:398) at clojure.lang.RT.load(RT.java:438) at clojure.lang.RT.load(RT.java:411) at clojure.core$load$fn__5018.invoke(core.clj:5530) at clojure.core$load.doInvoke(core.clj:5529) at clojure.lang.RestFn.invoke(RestFn.java:408) at clojure.core$load_one.invoke(core.clj:5336) at clojure.core$compile$fn__5023.invoke(core.clj:5541) at clojure.core$compile.invoke(core.clj:5540) at user$eval7.invoke(NO_SOURCE_FILE:1) at clojure.lang.Compiler.eval(Compiler.java:6619) at clojure.lang.Compiler.eval(Compiler.java:6609) at clojure.lang.Compiler.eval(Compiler.java:6582) at clojure.core$eval.invoke(core.clj:2852) at clojure.main$eval_opt.invoke(main.clj:308) at clojure.main$initialize.invoke(main.clj:327) at clojure.main$null_opt.invoke(main.clj:362) at clojure.main$main.doInvoke(main.clj:440) at clojure.lang.RestFn.invoke(RestFn.java:421) at clojure.lang.Var.invoke(Var.java:419) at clojure.lang.AFn.applyToHelper(AFn.java:163) at clojure.lang.Var.applyTo(Var.java:532) at clojure.main.main(main.java:37) Caused by: java.lang.IllegalArgumentException: Malformed member expression at clojure.lang.Compiler$HostExpr$Parser.parse(Compiler.java:943) at clojure.lang.Compiler.analyzeSeq(Compiler.java:6560) ... 155 more Compilation failed: Subprocess failed

lynaghk commented 11 years ago

Can you please provide some more details about:

jtoy commented 11 years ago

Sure, I tried it on a couple of different environments, the dev one I am testing from now is: clojure 1.5.1 [clj-liblinear "0.0.1-SNAPSHOT"] OS X 10.8.3 Leiningen 2.1.3 on Java 1.6.0_43 Java HotSpot(TM) 64-Bit Server VM

lynaghk commented 11 years ago

The version on clojars is likely very out of date---can you try pulling from master and using that?

I can take a look later this week and push a new version to Clojars if that works for you.

jtoy commented 11 years ago

I see on clojars that the clojars version is not the same as the github source so I used a newer version: https://clojars.org/org.clojars.juliobarros/clj-liblinear It compiles but then that errors with the same error that the test currently dies on: ClassCastException [I cannot be cast to [D clj-liblinear.core/train (core.clj:45)

lynaghk commented 11 years ago

I just pushed a new snapshot up to clojars; give that a shot.

jtoy commented 11 years ago

That fixes it @lynaghk, might be good to bump up the version number, thanks!