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lynxoid / nimbliner

nimble aligner that will map your reads to the references on a laptop
GNU General Public License v3.0
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Use BitTree to store kmers for the index (highly compressed, faster to read) #2

Open lynxoid opened 8 years ago

lynxoid commented 8 years ago

BitTree: https://github.com/lynxoid/bit_tree_cpp

lynxoid commented 8 years ago

(but is slower to query than BF)

lynxoid commented 8 years ago

use BitTree for kmer storage, BF for aligning