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lzamparo
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crisprML
Library design for CRISPr screen
BSD 3-Clause "New" or "Revised" License
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Set up data on Lilac
#2
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lzamparo
closed
7 years ago
lzamparo
commented
7 years ago
set up directory structure for tries, genomes, and output guides & figures.
script to move genomes & tries from warm storage into compute storage
recover mm10 coding exon region bed file
[Done, below /warm/leslie/zamparol/crisprML]
recover mm10 kmers file
[Done, below /warm/leslie/zamparol/crisprML/kmers/mm10/Cas9]
recover mm10, hg38 tries
[Done, at /warm/leslie/pritykin/projects/CRISPR/
/
_all/
_all_trie.dat]
lzamparo
commented
7 years ago
All done, ready to convert script & test on a single CDS
set up directory structure for tries, genomes, and output guides & figures.script to move genomes & tries from warm storage into compute storagerecover mm10 coding exon region bed file[Done, below /warm/leslie/zamparol/crisprML]recover mm10 kmers file[Done, below /warm/leslie/zamparol/crisprML/kmers/mm10/Cas9]recover mm10, hg38 tries[Done, at /warm/leslie/pritykin/projects/CRISPR/