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m-albert / fractal-ome-zarr-hcs-stitching

Fractal task(s) for registering and fusing OME-Zarr HCS using multiview-stitcher.
BSD 3-Clause "New" or "Revised" License
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Pyramid building issue #8

Closed nrepina closed 3 months ago

nrepina commented 3 months ago

Look into pyramid building issue

jluethi commented 3 months ago

I don't fully understand this rechunking issue during pyramid building. Something goes wrong with irregular chunk sizes if we use the default approach. The build_pyramid API allows to specify chunk_sizes and specifying the original chunk size (which makes sense to me) avoids this issue.

This will be added by #1 now and I can't reproduce the issue in that setting anymore