BA.5 Lineage Request

[m-crown]

This lineage is described at PHE Genomics Variant-Definitions, https://github.com/cov-lineages/pango-designation/issues/517 and CoVariants

[m-crown]

BA.5 Mutation Table

nt	product	AA	source
T670G	NSP1	S135R
C2790T	NSP3	T24I
G4184A	NSP3	G489S
C9344T	NSP4	L264F
C9534T	NSP4	T327I
C10029T	NSP4	T492I
C10449A	NSP5	P132H
11288-11296del	NSP6	S106del, G107del, F108del
C14408T	NSP12	P323L
C17410T	NSP13	R392C
A18163G	NSP14	I42V
C19955T	NSP15	T112I
C21618T	Surface Glycoprotein	T19I
21633_21641del	Surface Glycoprotein	L24S, P25del, P26del, A27del
ATACATG21794A	Surface Glycoprotein	H69del, H70del
G21987A	Surface Glycoprotein	G142D
T22200G	Surface Glycoprotein	V213G
G22578A	Surface Glycoprotein	G339D
C22674T	Surface Glycoprotein	S371F
T22679C	Surface Glycoprotein	S373P
G22775A	Surface Glycoprotein	D405N
A22786C	Surface Glycoprotein	R408S
G22813T	Surface Glycoprotein	K417N
T22882G	Surface Glycoprotein	N440K
T22917G	Surface Glycoprotein	L452R
G22992A	Surface Glycoprotein	S477N
C22995A	Surface Glycoprotein	T478K
A23013C	Surface Glycoprotein	E484A
T23018G	Surface Glycoprotein	F486V
A23055G	Surface Glycoprotein	Q498R
A23063T	Surface Glycoprotein	N501Y
T23075C	Surface Glycoprotein	Y505H
A23403G	Surface Glycoprotein	D614G
C23525T	Surface Glycoprotein	H655Y
T23599G	Surface Glycoprotein	N679K
C23604A	Surface Glycoprotein	P681H
C23854A	Surface Glycoprotein	N764K
G23948T	Surface Glycoprotein	D796Y
A24424T	Surface Glycoprotein	Q954H
T24469A	Surface Glycoprotein	N969K
C26060T	ORF3a	T223I
C26270T	E	T9I
G26529A	M	D3N
C26577G	M	Q19E
G26709A	M	A63T
G27788T	ORF7b	L11F
C28311T	N	P13L
28362_28370del	N	E31del, R32del, S33del
G28881A, G28882A, G28883C	N	R203K, G204R
A29510C	N	S413R

Synsnps (CoVariants)

C241T C3037T C4321T A9424G C10198T G10447A G12160A C12880T C15714T A20055G C25000T C25584T C27807T C27889T A28271T