incorrect rendering of snapshot (orientation, contours wrong)

[phraenquex]

This snapshot should look like this

but renders like this

Definitely orientation and map contour are wrong. Maybe other things too.

[boriskovar-m2ms]

@phraenquex please try now here https://fragalysis-tibor-default.xchem-dev.diamond.ac.uk/ and let me know if it's better

[phraenquex]

@boriskovar-m2ms thanks.

Yes it's better, but not yet correct.

This snapshot should look like this:

but looks like this - renders diff map as well, see that green blob.

[phraenquex]

@boriskovar-m2ms has done lots of fixes in #1321. This one goes back to yellow release.

[boriskovar-m2ms]

Last unresolved issue is that if you restore snapshot which should render density map in it's non-wireframe form it also renders the wireframe form over it

This is because restoration process is trying to remove wireframe representation but it's not yet present in the stage object because of the asynchronous nature of density maps loading. Putting in delay or naive synchronization doesn't work.

[mwinokan]

@boriskovar-m2ms please investigate if other aspects of the snapshot context are being reconstructed when the links are followed. Suggested things to investigate:

• Scrollbar position (as it was when the snapshot was generated)
• Selections
• Open UI elements

Fragalysis snapshots should reconstruct the exact UI as visible when the snapshot is generated. I.e. the same as a screenshot, but that can then be interacted with

[mwinokan]

@boriskovar-m2ms is working on this and #1419.

Boris says the scrollbar position may be difficult to implement as resolutions change what can be seen at once. The new spec should be, to set the scroll position so that the first compound displayed in the NGL viewer is visible in the hit navigator (and RHS equivalent).

[phraenquex]

Duplicates #1419.