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macarthur-lab / gene_lists

List of gene lists for genomic analyses.
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Add the NIH LINCS Program landmark genes to gene_lists #10

Open JohnG-001 opened 6 years ago

JohnG-001 commented 6 years ago

Add the NIH LINCS Program landmark genes to gene_lists

The list of 978 landmark genes is here:

https://clue.io/command?q=/gene-space%20lm

The NIH Library of Integrated Network-Based Cellular Signatures (LINCS) Program website: http://www.lincsproject.org/

The NIH LINCS program has developed a strategy of profiling ∼1000 carefully selected landmark genes and using computational methods to infer the expression of additional target genes.

LINCS aims to create a network-based understanding of biology by cataloging changes in gene expression and other cellular processes that occur when cells are exposed to a variety of perturbing agents.

Ref: Chen 2016, https://academic.oup.com/bioinformatics/article/32/12/1832/1743989

ericminikel commented 6 years ago

@JohnG-001 sounds fine to me. If you want to submit a pull request with a gene list in our format and an entry to the table on the README, I'll merge it.