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macarthur-lab / gnomad_browser

gnomAD browser pre-ASHG 2018
MIT License
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Suggestion (see picture): show variant population frequencies on gene page #122

Closed nabramovs closed 6 years ago

nabramovs commented 6 years ago

Hi,

I've installed a local version of gnomAD database and old browser for my research. I had to look for population specific variants, so I extended the browser a bit to display them as bar plots with tooltips like this:

gnomad_pop

So I decided to share an idea how this can be visualized.

Great work with the new gene page!

P.S. In case someone needs this functionality too, I've also created it as a chrome extension, but it significantly slows the loading speed as it had to do extra work for editing html page after it was loaded (so enable it only if/when needed): https://github.com/niab/gnomad_browser_extension

nawatts commented 6 years ago

Issue moved to macarthur-lab/gnomadjs#60