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macarthur-lab / gnomad_browser

gnomAD browser pre-ASHG 2018
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SNP table for STAT1 canonical transcript != ENST displayed #130

Closed joegeorgeson closed 5 years ago

joegeorgeson commented 6 years ago

I happened to notice that the canonical transcript for STAT1

http://gnomad.broadinstitute.org/gene/ENSG00000115415

Does not match the ENST which is written as canonical, but does if accessed another way

http://gnomad.broadinstitute.org/transcript/ENST00000361099

I only noticed because I linked the table to other databases via NM_007315~ENST00000361099

nawatts commented 5 years ago

In the current browser, both https://gnomad.broadinstitute.org/gene/ENSG00000115415 and https://gnomad.broadinstitute.org/gene/ENSG00000115415/transcript/ENST00000361099 identify ENST00000361099 as the canonical transcript.