macroevolution / bamm

A program for multimodel inference on speciation and trait evolution
GNU General Public License v2.0
33 stars 10 forks source link

Finish writing BAMMtools documentation #49

Closed redcurry closed 10 years ago

redcurry commented 10 years ago

Some sections of the documentation on using BAMMtools needs to be finished.

ptitle commented 10 years ago

maximumShiftCredibilityTree is still missing R documentation.

ptitle commented 10 years ago

actually there seems to be a maximumShiftCredibilityTree function and a maximumShiftCredibility function. I'm pretty sure they're the same?

drabosky commented 10 years ago

There should not be a maximumShiftCredibilityTree function in BAMMtools - it changed names to maximumShiftCredibility and I deleted the other version.

On Feb 6, 2014, at 9:09 PM, ptitle wrote:

maximumShiftCredibilityTree is still missing R documentation.

— Reply to this email directly or view it on GitHub.

ptitle commented 10 years ago

I've built BAMMtools from the latest version, and I can call both of them in R. Could it be that I have remnant files in my bamm folder?

drabosky commented 10 years ago

yes - I would delete your bammtools directory and checkout a clean copy

On Feb 6, 2014, at 9:14 PM, ptitle wrote:

I've built BAMMtools from the latest version, and I can call both of them in R. Could it be that I have remnant files in my bamm folder?

— Reply to this email directly or view it on GitHub.

ptitle commented 10 years ago

After confirming with Mike, both functions appear to still exist in BAMMtools.