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macroevolution / bamm

A program for multimodel inference on speciation and trait evolution
GNU General Public License v2.0
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Possible (mis) handling of event data in plot.bammdata and other fxns? #76

Closed drabosky closed 10 years ago

drabosky commented 10 years ago

haven't looked into this but had found that plot.bammdata did not work when I input a BAMM run that had 0 rate shifts (e.g. only the root process for each sample). the R message was:

Error in dtRates(ephy, 0.01) : REAL() can only be applied to a 'numeric', not a 'integer'

we have probably not checked these but all BAMMtools fxns need to work with "single regime" output (or return an appropriate error message).

blueraleigh commented 10 years ago

Can you git pull and try again? Without seeing the event data I'm guessing that it was a constant rate root process and that R was storing the lambda shift parameter as an integer. I modified getEventData to cast all lambda and mu parameters to double.