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macronucleus / Chromagnon

Image correction software for chromatic shifts in fluorescence microscopic images
GNU General Public License v2.0
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vendorised version of Priithon fails without fftw3 #3

Closed carandraug closed 6 years ago

carandraug commented 7 years ago

Priithon seems to have a workaround for the lack of fftw3 module. However, that workaround seems to be broken:

$ python chromagnon/main.py 
Traceback (most recent call last):
  File "chromagnon/main.py", line 47, in <module>
    from PriCommon.ndviewer import main as aui
  File "/home/carandraug/.local/lib/python2.7/site-packages/Chromagnon-0.55-py2.7.egg/PriCommon/ndviewer/__init__.py", line 3, in <module>
    import glfunc, viewerCommon, viewer2, main
  File "/home/carandraug/.local/lib/python2.7/site-packages/Chromagnon-0.55-py2.7.egg/PriCommon/ndviewer/main.py", line 12, in <module>
    from PriCommon import guiFuncs as G ,microscope, bioformatsIO, imgResample
  File "/home/carandraug/.local/lib/python2.7/site-packages/Chromagnon-0.55-py2.7.egg/PriCommon/imgResample.py", line 1, in <module>
    from Priithon.all import U, N
  File "/home/carandraug/.local/lib/python2.7/site-packages/Chromagnon-0.55-py2.7.egg/Priithon/all.py", line 38, in <module>
    import fftfuncs as F
  File "/home/carandraug/.local/lib/python2.7/site-packages/Chromagnon-0.55-py2.7.egg/Priithon/fftfuncs.py", line 11, in <module>
    import fftwam as fftw
  File "/home/carandraug/.local/lib/python2.7/site-packages/Chromagnon-0.55-py2.7.egg/Priithon/fftwam.py", line 97, in <module>
    def rfft(a, nthreads=ncpu):
NameError: name 'ncpu' is not defined
macronucleus commented 7 years ago

I believe this is fixed in version 0.56. Thank you.