madagiurgiu25 / decoil-pre

Reconstruct ecDNA from long-read data using Decoil tool
BSD 3-Clause "New" or "Revised" License
7 stars 0 forks source link

Genes contained within ecDNA #13

Open eesiribloom opened 3 months ago

eesiribloom commented 3 months ago

Would there be a way to extract the genes that are contained within ecDNA. The decoil-viz html report shows protein-coding genes in the visualisations but it would be helpful to have a list or table of these genes as part of the summary in the report or as part of the output of decoil.