Closed GoogleCodeExporter closed 9 years ago
I can't reproduce it on my iMac and Debian Lenny is also still going strong.
Jan 29 23:28:17:
Jan 29 23:28:17: =========================================================
Jan 29 23:28:17: |P|P|S|S|
Jan 29 23:28:17: Distributed Parallel Processing Shell Script vers. 2.85
Jan 29 23:28:17: =========================================================
Jan 29 23:28:17: Hostname: Louwrentius.local
Jan 29 23:28:17: ---------------------------------------------------------
Jan 29 23:28:17: CPU: Intel Core i7 3,4 GHz
Jan 29 23:28:17: Starting 50 parallel workers.
Jan 29 23:28:17: ---------------------------------------------------------
Jan 29 23:46:42: Currently 1 percent complete. Processed 10404 of 1000002.
Jan 29 23:46:41: ETA: Sun Jan 29 23:28:17 CET 2012
Seems like an issue with Ubuntu & Bash?
Seems like a bug I can't do anything about this. Can you test on another Linux
flavour?
Original comment by Louwrentius
on 29 Jan 2012 at 10:48
I saw this on Linux:
Jan 30 00:41:37: 2% complete. Processed 24841 of 1000002. Failed 0/1000002.
Jan 30 00:41:37: ETA: Sun Jan 29 23:30:55 CET 2012nterrupted system call
What this means is unknown to me.
Original comment by Louwrentius
on 29 Jan 2012 at 11:42
I can't edit the title, but it should say 100 000 instead of 10 000.
I think you missed this line:
Processed 99999 of 541958
Original comment by hulselma...@gmail.com
on 30 Jan 2012 at 11:23
Doing a second run!
Original comment by Louwrentius
on 1 Feb 2012 at 9:20
No problems on the iMac:
Louwrentius:tmp nan03$ ./ppss -f miljoen -c 'echo '
Feb 01 22:19:49:
Feb 01 22:19:49: =========================================================
Feb 01 22:19:49: |P|P|S|S|
Feb 01 22:19:49: Distributed Parallel Processing Shell Script vers. 2.85
Feb 01 22:19:49: =========================================================
Feb 01 22:19:49: Hostname: Louwrentius.local
Feb 01 22:19:49: ---------------------------------------------------------
Feb 01 22:19:49: CPU: Intel Core i7 3,4 GHz
Feb 01 22:19:49: Found 8 logic processors.
Feb 01 22:19:49: Starting 8 parallel workers.
Feb 01 22:19:49: ---------------------------------------------------------
Feb 01 22:46:27: Currently 1 percent complete. Processed 14595 of 1000002.
Feb 02 08:56:41: Currently 24 percent complete. Processed 241700 of 1000002.
Feb 02 08:56:41: ETA: Wed Feb 1 22:19:49 CET 2012
Original comment by Louwrentius
on 2 Feb 2012 at 7:57
Trying with -c 'echo ' like you did, works for me (goes past 100 000). But echo
is a bash build in.
When trying with the external echo command, it still stops at 99 999:
$ /home/ghuls/ppss -p 100 -f ./sample2.pos -c '/bin/echo '
Feb 04 22:52:20:
Feb 04 22:52:20: =========================================================
Feb 04 22:52:20: |P|P|S|S|
Feb 04 22:52:20: Distributed Parallel Processing Shell Script vers. 2.97
Feb 04 22:52:20: =========================================================
Feb 04 22:52:20: Hostname: seq-srv-01
Feb 04 22:52:20: ---------------------------------------------------------
Feb 04 22:52:20: CPU: Intel(R) Xeon(R) CPU X7560 @ 2.27GHz
Feb 04 22:52:21: Starting 100 parallel workers.
Feb 04 22:52:21: ---------------------------------------------------------
Feb 06 07:54:48: 18% complete. Processed 99999 of 541958. Failed 0/541958.
Feb 06 07:54:39: ETA: Sat Feb 11 05:24:59 CET 2012
Original comment by hulselma...@gmail.com
on 6 Feb 2012 at 8:34
Can you please provide an example which provokes the crash and that I will be
able to reproduce?
Original comment by Louwrentius
on 9 Feb 2012 at 7:50
Did you try your line:
./ppss -f miljoen -c 'echo '
with an external echo binary?
./ppss -f miljoen -c '/bin/echo '
This stopped at 99 999 for me:
./ppss -p 100 -f ./sample2.pos -c '/bin/echo '
This worked fine for me (build-in echo):
./ppss -p 100 -f ./sample2.pos -c 'echo '
$ bash --version
GNU bash, version 4.2.8(1)-release (x86_64-pc-linux-gnu)
$ cat /etc/lsb-release
DISTRIB_ID=Ubuntu
DISTRIB_RELEASE=11.04
DISTRIB_CODENAME=natty
DISTRIB_DESCRIPTION="Ubuntu 11.04"
Original comment by hulselma...@gmail.com
on 10 Feb 2012 at 7:57
This is on mac os x Lion:
{{{
Louwrentius:tmp nan03$ ./ppss -f miljoen -c '/bin/echo '
Feb 16 00:06:35:
Feb 16 00:06:35: =========================================================
Feb 16 00:06:35: |P|P|S|S|
Feb 16 00:06:35: Distributed Parallel Processing Shell Script vers. 2.85
Feb 16 00:06:35: =========================================================
Feb 16 00:06:35: Hostname: Louwrentius.local
Feb 16 00:06:35: ---------------------------------------------------------
Feb 16 00:06:35: CPU: Intel Core i7 3,4 GHz
Feb 16 00:06:35: Found 8 logic processors.
Feb 16 00:06:35: Starting 8 parallel workers.
Feb 16 00:06:35: ---------------------------------------------------------
Feb 16 09:07:51: Currently 21 percent complete. Processed 216225 of 1000002.
Feb 16 09:07:51: ETA: Thu Feb 16 00:06:35 CET 2012
}}}
Original comment by Louwrentius
on 16 Feb 2012 at 8:08
I will test it on debian, do'nt have ubuntu around. Guess it's a bug in bash.
Original comment by Louwrentius
on 16 Feb 2012 at 8:09
Possibly.
Original comment by hulselma...@gmail.com
on 17 Feb 2012 at 1:09
Ok, I can reproduce this issue on Debian Squeeze.
Mac:
bash-3.2$ bash --version
GNU bash, version 3.2.48(1)-release (x86_64-apple-darwin11)
Copyright (C) 2007 Free Software Foundation, Inc.
Debian 6.0.4:
dpkg -l | grep -i bash
ii bash 4.1-3 The GNU
Bourne Again SHell
Unfortunately, you may need to try and replace / update bash on your system or
find another program (parallel?)
that does the job for you.
Original comment by Louwrentius
on 17 Feb 2012 at 8:10
I already solved my problem with parallel 2 weeks ago. But thanks for
mentioning it.
Original comment by hulselma...@gmail.com
on 18 Feb 2012 at 4:37
Original comment by Louwrentius
on 21 Feb 2012 at 9:36
Original issue reported on code.google.com by
hulselma...@gmail.com
on 17 Jan 2012 at 9:07