madscatt / zazmol

Library for defining molecular objects to create simulation and analysis programs To install: python setup.py install dependencies: numpy, mocker
GNU General Public License v3.0
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possible error in tests on some platforms? #51

Open madscatt opened 7 years ago

madscatt commented 7 years ago

During PDB Rx development I found that the merge command doesn't copy the unique entries lists - i.e. ._segname etc. So I modified my version and tried running the tests. They failed with a segfault. I then realised that I had never run the tests so tried the same with a clean install from your github repository and got the same result:

test a dcd which doent exist ... Segmentation fault (core dumped)

I tracked this down to the file: test_sasmol/test_sasio/test_intg_sasio_Files_close_dcd_read.py

I get the same error on two machines - running Ubuntu 14.04 and 15.04. They are both 64 bit. Do you know what is causing this issue?

I'll put something in trac if this isn't something you are aware of (I could also/instead put something in the github issue tracker).

Cheers Dave