magicDGS / ReadTools

A Universal Toolkit for Handling Sequence Data from Different Sequencing Platforms
https://magicdgs.github.io/ReadTools/
MIT License
6 stars 3 forks source link

Add walkthrough to ReadTools documentation pages #233

Open magicDGS opened 7 years ago

magicDGS commented 7 years ago

This requires a small dataset and example code for running ReadTools.

magicDGS commented 7 years ago

@AnnaMariaL suggested to do two sections in the walkthrough:

Standardization

Processing

magicDGS commented 6 years ago

We can also provide argument files for common processing pipelines. For example, for paired-BAM files it will include the --interleavedInput to allow users to re-use it and do not forget to add it (that's one of the most common mistakes when processing BAM files).