magicDGS / ReadTools

A Universal Toolkit for Handling Sequence Data from Different Sequencing Platforms

https://magicdgs.github.io/ReadTools/

MIT License

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Force locale for base test class #485

Closed magicDGS closed 5 years ago

magicDGS commented 5 years ago

RTBaseTest extends BaseTest, but none of them set the locale to US-EN as the Main class does. Thus, test dependent on formatting and other locale-related classes that does not call Main might fail in other systems.

This is a temporary fix until we backport to GATK the call to force the JVM in tests to use the same locale.

Closes #483

codecov[bot] commented 5 years ago

Codecov Report

Merging #485 into master will not change coverage. The diff coverage is n/a.

@@             Coverage Diff             @@
##              master      #485   +/-   ##
===========================================
  Coverage     93.412%   93.412%           
  Complexity       991       991           
===========================================
  Files             95        95           
  Lines           2641      2641           
  Branches         284       284           
===========================================
  Hits            2467      2467           
  Misses           133       133           
  Partials          41        41