Implement deprecated tool registry to better error message if requested

magicDGS / ReadTools

A Universal Toolkit for Handling Sequence Data from Different Sequencing Platforms

https://magicdgs.github.io/ReadTools/

MIT License

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Implement deprecated tool registry to better error message if requested #488

Closed magicDGS closed 6 years ago

magicDGS commented 6 years ago

Similar to org.broadinstitute.hellbender.cmdline.DeprecatedToolsRegistry, we can have our own registry for legacy tools (pre-release version) - this should point out to the substitute tools. In addition, if experimental/beta tools evolve, we can add them here to point to the correct ones.