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magicDGS / ReadTools

A Universal Toolkit for Handling Sequence Data from Different Sequencing Platforms
https://magicdgs.github.io/ReadTools/
MIT License
6 stars 3 forks source link

Update CHANGELOG #522

Closed magicDGS closed 5 years ago

codecov[bot] commented 5 years ago

Codecov Report

Merging #522 into master will decrease coverage by 0.024%. The diff coverage is n/a.

Impacted file tree graph

@@               Coverage Diff               @@
##              master      #522       +/-   ##
===============================================
- Coverage     93.559%   93.535%   -0.024%     
- Complexity      1078      1184      +106     
===============================================
  Files            103       104        +1     
  Lines           2841      3047      +206     
  Branches         303       334       +31     
===============================================
+ Hits            2658      2850      +192     
- Misses           137       146        +9     
- Partials          46        51        +5
Impacted Files Coverage Δ Complexity Δ
...s/tools/barcodes/dictionary/BarcodeDictionary.java 87.234% <0%> (-1.001%) 30% <0%> (+10%)
src/main/java/org/magicdgs/readtools/Main.java 82.609% <0%> (-0.725%) 30% <0%> (+15%)
...va/org/magicdgs/readtools/engine/RTDataSource.java 87.5% <0%> (-0.682%) 41% <0%> (+4%)
.../read/stats/engine/ProperStatWindowCalculator.java 95.2% <0%> (-0.452%) 67% <0%> (+24%)
...dtools/documentation/RTHelpDocWorkUnitHandler.java 95.122% <0%> (-0.333%) 25% <0%> (+12%)
...gicdgs/readtools/utils/read/ReadReaderFactory.java 80% <0%> (ø) 12% <0%> (+6%) :arrow_up:
...readtools/utils/read/writer/ReadToolsIOFormat.java 100% <0%> (ø) 10% <0%> (+4%) :arrow_up:
...rg/magicdgs/readtools/engine/ReadToolsProgram.java 100% <0%> (ø) 15% <0%> (+7%) :arrow_up:
...ormer/trimming/ApplyTrimResultReadTransformer.java 100% <0%> (ø) 10% <0%> (?)
...ls/barcodes/dictionary/decoder/BarcodeDecoder.java 90.419% <0%> (+2.324%) 44% <0%> (+14%) :arrow_up: