Implement Fisher's Exact Test for allele frequency differences

magicDGS / popgenlib

Population Genetics Java Library

MIT License

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Implement Fisher's Exact Test for allele frequency differences #6

Open magicDGS opened 7 years ago

magicDGS commented 6 years ago

Because this is going to be required for a project depending on GATK4, maybe this can be implemented there directly using org.broadinstitute.hellbender.utils.FisherExactTest.twoSidedPValue(). Anyway, it would be nice to have our own implementation here for completeness...