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magicDGS / thaplv

Tools for Haploid/Haplotype VCFs
BSD 3-Clause "New" or "Revised" License
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Implement BCI haplotype calling #10

Open magicDGS opened 8 years ago

magicDGS commented 8 years ago

Following Kaput et al. 2014, implement the haplotype calling algorithm based on the binomial confidence interval.

magicDGS commented 8 years ago

We can use the BinomialConfidenceInterval from Apache math to compute the confidence interval.