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magicDGS / thaplv

Tools for Haploid/Haplotype VCFs
BSD 3-Clause "New" or "Revised" License
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Port ReferenceSimilarity #20

Closed magicDGS closed 8 years ago

magicDGS commented 8 years ago

Because now IBDOutput use a SimpleInterval for the windows and it is merging, this could introduce a difference in the output of ReferenceSimilarity.

For checking if the regions are the same, we should convert the output to a bed file and joining intervals.

magicDGS commented 8 years ago

Port in #27, already checked and working as expected.