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magicDGS / thaplv

Tools for Haploid/Haplotype VCFs
BSD 3-Clause "New" or "Revised" License
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Command line proper validation + simpler Main #52

Closed magicDGS closed 7 years ago

magicDGS commented 7 years ago
codecov-io commented 7 years ago

Current coverage is 83.723% (diff: 87.500%)

Merging #52 into master will increase coverage by 0.595%

@@             master        #52   diff @@
==========================================
  Files            50         50          
  Lines          1375       1370     -5   
  Methods           0          0          
  Messages          0          0          
  Branches        223        222     -1   
==========================================
+ Hits           1143       1147     +4   
+ Misses          181        170    -11   
- Partials         51         53     +2
Diff Coverage File Path
••••• 50% ...rc/main/java/org/magicdgs/thaplv/tools/GetFasta.java
••••••• 75% src/main/java/org/magicdgs/thaplv/Main.java
•••••••••• 100% .../broadinstitute/hellbender/engine/HaploidWalker.java
•••••••••• 100% ...ions/HaplotypeModelWithPloidyArgumentCollection.java
•••••••••• 100% .../main/java/org/magicdgs/thaplv/tools/ld/LDdecay.java
•••••••••• 100% ...main/java/org/magicdgs/thaplv/tools/ibd/IBDTool.java
•••••••••• 100% ...entcollections/HaplotypeModelArgumentCollection.java

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