More efficient peeling - Githubissues

magnusdv / pedprobr

Pedigree probabilities in R

GNU General Public License v2.0

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Closed magnusdv closed 7 months ago

magnusdv commented 9 months ago

This PR makes the peeling algorithm more efficient, by:

Less footprint for untyped founders with only 1 child (sample alleles directly, avoid complete set of genotypes)
Avoid large 3-dim arrays in peeling calculations