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magnusdv / quickped

An online pedigree tool for research applications. Build pedigrees interactively and store as images or text files in ped format. QuickPed also computes a variety of relatedness coefficients and offers verbal descriptions of pairwise relationships.
https://magnusdv.shinyapps.io/quickped
GNU General Public License v3.0
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Problem reading export from quickped #4

Closed thoree closed 3 years ago

thoree commented 3 years ago

Very nice extensions! Great fun with the Habsburgs, verbalisr,, Jacquard, ... I was unable to read the Habsburg ped fil into R with readPed. However, if I change labels to 1,2,... before Save ped file, the problem goes away.

magnusdv commented 3 years ago

Thanks, this is a known problem: readPed() doesn't pass on sep = "\t" to read.table().

I'll open an issue for this in pedtools.