magnusdv / quickped

An online pedigree tool for research applications. Build pedigrees interactively and store as images or text files in ped format. QuickPed also computes a variety of relatedness coefficients and offers verbal descriptions of pairwise relationships.

https://magnusdv.shinyapps.io/quickped

GNU General Public License v3.0

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header of exported .ped file missing # #8

Closed yvancouver closed 1 year ago

yvancouver commented 2 years ago

Not sure if it is intended, the exported .ped is missing the # in the header.

famid id fid mid sex aff 1 1 0 0 1 1 1 2 0 0 2 1 1 3 1 2 1 1

instead of

famid id fid mid sex aff

1 1 0 0 1 1 1 2 0 0 2 1 1 3 1 2 1 1

magnusdv commented 2 years ago

This is per the defaults of readPed()/writePed() of pedtools operating behind the scenes of QuickPed.

A variety of slightly different .ped formats are used by different software, unfortunately. QuickPed allows you to modify the format in a couple of ways (including skipping the header line) but no prefixed # as of yet, sorry.