better naming of output (intermediate) files

mahulchak / quickmerge

A simple and fast metassembler and assembly gap filler designed for long molecule based assemblies.

GNU General Public License v3.0

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better naming of output (intermediate) files #31

Closed lsterck closed 5 years ago

lsterck commented 5 years ago

Hi,

you have a great software here. I just wanted to bring something up to perhaps make it even better. I think it might be useful to name the files the program creates more uniform. I mean: name them all using the prefix that is given on the cmdline. I notice that some files have a general name (eg. self_oneline.fa or the merged.fasta outputfile) which causes them to be overwritten when I run several jobs at once (where each uses a different prefix though).

thx and keep up the good work.

mahulchak commented 5 years ago

Thanks for your feedback @lsterck . Quickmerge now has a prefix option :)