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mahulchak / quickmerge

A simple and fast metassembler and assembly gap filler designed for long molecule based assemblies.
GNU General Public License v3.0
200 stars 31 forks source link

better naming of output (intermediate) files #31

Closed lsterck closed 6 years ago

lsterck commented 6 years ago

Hi,

you have a great software here. I just wanted to bring something up to perhaps make it even better. I think it might be useful to name the files the program creates more uniform. I mean: name them all using the prefix that is given on the cmdline. I notice that some files have a general name (eg. self_oneline.fa or the merged.fasta outputfile) which causes them to be overwritten when I run several jobs at once (where each uses a different prefix though).

thx and keep up the good work.

mahulchak commented 6 years ago

Thanks for your feedback @lsterck . Quickmerge now has a prefix option :)