search

mahulchak / svmu

A program to call variants from genome alignment
GNU General Public License v3.0
76 stars 18 forks source link

Get none results #21

Open shehongbing opened 3 years ago

shehongbing commented 3 years ago

Hi there, when I used SVMU based on the nucmer, and get empty result besides cords.prefix.txt file.

my command is

alignment using nucmer

nucmer -l 80 ara.fa nh.fa -p nh_ara

run svmu

svmu nh_ara.delta nh.fa ara.fa l last_out.txt prefix

The file 'last_out.txt' is an empty file.

Thx