Q96 introgression - Githubissues

malariagen / ag1000g-phase3-data-paper

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Closed hardingnj closed 3 years ago

hardingnj commented 3 years ago

Ready for review.

A few things in here:

updates to population definitions (cc @jonbrenas ) there was a bug > 10, not >= 10.
new population definitions csv
updated PCA plot
made karyotype calls
introgression gmin. Won't be used in paper because of reasons discussed Monday- but would like to include then remove, so at least leaves a record in repo.

review-notebook-app[bot] commented 3 years ago

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