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malariagen / datalab

Repo for files and issues related to cloud deployment of JupyterHub.
MIT License
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Sanger-wide installation of Jupyter notebook #38

Closed roamato closed 5 years ago

roamato commented 5 years ago

@alimanfoo @slejdops Sanger is considering creating ready-to-go/centralised instances of Jupyter notebook (note: not Hub) so that people can use it without bothering with installations etc. They are in the requirements gathering phase and I've got the following message:

do you have recipes for how people would want jupiter notebook and rstudio set up, I am going to start working on instances that can access home directories and lustre soon so it would be good to know what people want/need.

and

expecting a set of docker files that I could migrate to singularity, but anything would give me an idea of the requirements

Don't know if we'll end up use directly, but would it be OK to share our Docker images? Can you point me to the latest one?

alimanfoo commented 5 years ago

Sure, latest is here: https://github.com/malariagen/datalab/tree/master/dockerfiles/notebook

There's obviously some stuff in there that wouldn't be needed if it's just a single-user notebook server.

On Thu, 18 Oct 2018 at 12:37, Roberto Amato notifications@github.com wrote:

@alimanfoo https://github.com/alimanfoo @slejdops https://github.com/slejdops Sanger is considering creating ready-to-go/centralised instances of Jupyter notebook (note: not Hub) so that people can use it without bothering with installations etc. They are in the requirements gathering phase and I've got the following message:

do you have recipes for how people would want jupiter notebook and rstudio set up, I am going to start working on instances that can access home directories and lustre soon so it would be good to know what people want/need.

and

expecting a set of docker files that I could migrate to singularity, but anything would give me an idea of the requirements

Don't know if we'll end up use directly, but would it be OK to share our Docker images? Can you point me to the latest one?

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roamato commented 5 years ago

Thanks! I'll let you know how it goes